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Account

Table 1 Energy parameters (kJ/mol) of diphenyl-N-(trichloroacetyl)-amidophosphate (HL) interaction alone and in combination with C60 fullerene with DNA double-helix

From: C60 Fullerene Effects on Diphenyl-N-(trichloroacetyl)-amidophosphate Interaction with DNA In Silico and Its Cytotoxic Activity Against Human Leukemic Cell Line In Vitro

Structure

The energy parameters

 

FreE

Cntc

Hbnd

Bump

Int

Binding with a major DNA groove

 HL

− 6.6

− 45.1

− 2.0

2.5

6.3

 HL+С60

− 23.1

− 75.7

− 2.3

8.8

5.0

Binding with a minor DNA groove

 HL

− 13.1

− 56.8

− 1.8

2.5

3.6

 HL+С60

− 23.3

− 84.7

0.0

7.8

6.8

Intercalation into a minor DNA groove

 HL

− 8.0

− 62.2

− 1.0

6.2

8.7

 HL+С60

− 8.0

− 62.2

− 1.0

6.2

8.7

 С60+HL

− 23.5

− 100

0.0

20.0

5.2

  1. FreE the total energy of compounds binding with DNA; Cntc the contact energy of compounds interaction with DNA; Hbnd the energy of hydrogen bonds; Bump the energy of steric clashes between DNA and build-in compounds; Int the energy of steric clashes between the atoms of build-in compounds

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