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Table 1 Data employed for demonstrating the effectiveness of the proposed nano-metering protocol

From: Nano-metering of Solvated Biomolecules Or Nanoparticles from Water Self-Diffusivity in Bio-inspired Nanopores

MOL dP[nm] dp[nm] \(n_{p}^{o}\) D [m2/s] θ θ Vtot[nm3] δp[nm] SASp[nm2] δP[nm] SASP[nm2] \(n_{p}^{e}\)
IONP 8.13 1.97 4 1.91E–09 0.31 0.37 200.75 0.50 21.64 0.33 140.47 2.66
IONP 8.13 1.97 8 1.33E–09 0.57 0.85 180.90 0.50 21.64 0.33 140.47 10.06
IONP 8.13 1.27 16 1.46E–09 0.52 0.73 193.59 0.46 12.61 0.33 140.47 16.16
IONP 11.04 1.27 36 1.62E–09 0.44 0.59 351.63 0.46 12.61 0.33 194.00 24.47
IONP 11.04 1.97 20 1.37E–09 0.56 0.81 313.15 0.50 21.64 0.33 194.00 17.74
IONP 11.04 1.27 66 6.63E–10 0.88 2.09 300.98 0.46 12.61 0.33 194.00 97.30
1AKI 11.04 2 2.06E–09 0.24 0.28 375.71 0.32 67.36 0.33 194.00 1.95
1AKI 11.04 3 1.93E–09 0.30 0.36 357.35 0.32 67.36 0.33 194.00 3.08
1AKI 11.04 9 1.44E–09 0.52 0.74 247.23 0.32 67.36 0.33 194.00 5.66
1UBQ 11.04 7 1.96E–09 0.29 0.34 338.10 0.31 48.19 0.33 194.00 3.48
1UBQ 11.04 9 1.55E–09 0.47 0.64 316.87 0.31 48.19 0.33 194.00 9.38
1UBQ 11.04 12 1.38E–09 0.55 0.81 285.02 0.31 48.19 0.33 194.00 11.14
  1. Data for the iron-oxide nanoparticles (IONP) have been taken from the supplementary information in [24], while those for proteins (1AKI and 1UBQ) have been computed for the present work. Notice that Eq. (1) has been applied considering DC=0.39×10−9m2/s. \(n_{p}^{e}\) is the number of particles estimated using the proposed protocol; \(n_{p}^{o}\) the original (actual) number of particles in the simulated setups